← Leaderboards
Trey Ideker
University Of California, San Francisco
$62,370,509
Attributed
$96,431,137
Total exposure
42
Grants
38
Lead (contact PI)
Attributed= this PI's even-split share of every grant they're on (the fair, additive number). Exposure = full size of all those grants.
Funding over time
peak $15.6M · FY2005–25$20M$15M$10M$5M$0
'05
'06
'07
'08
'09
'10
'11
'12
'13
'14
'15
'16
'17
'18
'19
'20
'21
'22
'23
'24
'25
Funding mix
By agency
NIH$151,210,426 · 47
By mechanism
P41$32,018,206 · 20
U54$25,008,422 · 8
R01$23,830,988 · 5
OT2$21,026,388 · 1
P50$20,403,665 · 6
U01$15,910,308 · 1
Top collaborators
- Nevan J Krogan30 shared
- Prashant Mali7 shared
- Martin Kampmann6 shared
- Arthur Jeremy Willsey6 shared
- Jean-Christophe BãLisle-Pipon4 shared
- Jake Yue Chen4 shared
- Timothy W Clark4 shared
- Jeff M Hasty4 shared
Most similar at University Of California, San Francisco
Same institution · by research overlap
- Jun S Song$10,223,558
- Nevan J Krogan$73,195,859
- Katherine P Rankin$14,490,889
- Sergio E Baranzini$4,661,297
- Alice Summer Tang$186,587
Others in their field
Top investigators on “Resources”
- Sonia M Thomas · Research Triangle Institute$700,865,642
- David Heimbrook · Leidos Biomedical Research, Inc.$688,986,350
- Bambra Strokes · Ppd Development Lp$526,656,217
- Tracy L Nolen · Research Triangle Institute$474,487,152
- Eric S Lander · Whitehead Institute For Biomedical Res$341,717,134
- Eric Jeffrey Topol · Cleveland Clinic Lerner Col/Med-Cwru$311,514,701
Research focus
ResourcesMapsResearch PersonnelBiologicalCellsPathway InteractionsGenesTechnologyProteinsMolecularBiologyBioinformaticsComputer SoftwareFundingDatabasesGeneticBasePathway AnalysisComplexPhenotypeData SetCommunitiesMalignant NeoplasmsTraining
Grant awards (200)
Bridge2AI: Cell Maps for AI (CM4AI) Data Generation Project$5,289,382
OT2 · FY2025 · OD · contact PI
Bridge2AI: Cell Maps for AI (CM4AI) Data Generation Project$5,224,537
OT2 · FY2025 · OD · contact PI
The Cancer Cell Map Initiative v2.0$2,378,309
U54 · FY2025 · CA
CYTOSCAPE: AN ECOSYSTEM FOR NETWORK GENOMICS$1,196,962
U24 · FY2025 · HG · contact PI
Next generation massively multiplexed combinatorial genetic screens$678,814
R01 · FY2025 · HG
Project 3: From Networks and Structures to Hierarchical Whole Cell Models of Cancer$496,996
U54 · FY2025 · CA · contact PI
CORE 3 : Modeling Core$295,573
U19 · FY2025 · AI · contact PI
Core 2: Software Infrastructure for Network Models and Cell Maps$79,000
U54 · FY2025 · CA · contact PI
The Cancer Cell Map Initiative v2.0$2,259,341
U54 · FY2024 · CA
National Resource for Network Biology (NRNB)$1,199,754
P41 · FY2024 · GM · contact PI
CYTOSCAPE: AN ECOSYSTEM FOR NETWORK GENOMICS$1,196,962
U24 · FY2024 · HG · contact PI
Next generation massively multiplexed combinatorial genetic screens$684,387
R01 · FY2024 · HG
Project 3: From Networks and Structures to Hierarchical Whole Cell Models of Cancer$472,142
U54 · FY2024 · CA · contact PI
CORE 3 : Modeling Core$294,562
U19 · FY2024 · AI · contact PI
Administration and Management$236,035
P41 · FY2024 · GM · contact PI
Driving Biomedical Projects Portfolio$173,023
P41 · FY2024 · GM · contact PI
TR&D 2 - Modeling Multi-Scale Network Architecture$100,337
P41 · FY2024 · GM · contact PI
Core 2: Software Infrastructure for Network Models and Cell Maps$75,049
U54 · FY2024 · CA · contact PI
Bridge2AI: Cell Maps for AI (CM4AI) Data Generation Project$5,618,012
OT2 · FY2023 · OD · contact PI
The Cancer Cell Map Initiative v2.0$2,321,411
U54 · FY2023 · CA
CYTOSCAPE: AN ECOSYSTEM FOR NETWORK GENOMICS$1,441,919
U24 · FY2023 · HG · contact PI
National Resource for Network Biology (NRNB)$1,199,890
P41 · FY2023 · GM · contact PI
Next generation massively multiplexed combinatorial genetic screens$698,956
R01 · FY2023 · HG
Project 3: From Networks and Structures to Hierarchical Whole Cell Models of Cancer$476,818
U54 · FY2023 · CA · contact PI
Center for Genetic Studies of Drug Abuse in Outbred Rats$355,499
P50 · FY2023 · DA · contact PI
CORE 3 : Modeling Core$336,905
U19 · FY2023 · AI · contact PI
Administration and Management$238,402
P41 · FY2023 · GM · contact PI
Driving Biomedical Projects Portfolio$172,626
P41 · FY2023 · GM · contact PI
Development of ex-vivo tumor culture for systems network biology and personalized medicine$152,275
U54 · FY2023 · CA
Administrative Supplement for Equipment in Support of NRNB Aims$149,176
P41 · FY2023 · GM · contact PI
TR&D 2 - Modeling Multi-Scale Network Architecture$100,123
P41 · FY2023 · GM · contact PI
Core 2: Software Infrastructure for Network Models and Cell Maps$77,419
U54 · FY2023 · CA · contact PI
Bridge2AI: Cell Maps for AI (CM4AI) Data Generation Project$4,894,457
OT2 · FY2022 · OD · contact PI
The Cancer Cell Map Initiative v2.0$2,376,522
U54 · FY2022 · CA
CYTOSCAPE: AN ECOSYSTEM FOR NETWORK GENOMICS$1,543,069
U24 · FY2022 · HG · contact PI
National Resource for Network Biology (NRNB)$1,202,095
P41 · FY2022 · GM · contact PI
Project 3: From Networks and Structures to Hierarchical Whole Cell Models of Cancer$538,261
U54 · FY2022 · CA · contact PI
Center for Genetic Studies of Drug Abuse in Outbred Rats$355,500
P50 · FY2022 · DA · contact PI
Administration and Management$204,880
P41 · FY2022 · GM · contact PI
Driving Biomedical Projects Portfolio$178,965
P41 · FY2022 · GM · contact PI
TR&D 2 - Modeling Multi-Scale Network Architecture$106,260
P41 · FY2022 · GM · contact PI
Core 2: Software Infrastructure for Network Models and Cell Maps$79,000
U54 · FY2022 · CA · contact PI
The Psychiatric Cell Map Initiative: Connecting Genomics, Subcellular Networks, and Higher Order Phenotypes$4,247,206
U01 · FY2021 · MH
Research Center for Cancer Systems Biology: Cancer Cell Map Initiative$1,943,088
U54 · FY2021 · CA
National Resource for Network Biology (NRNB)$1,210,147
P41 · FY2021 · GM · contact PI
CORE 1: Data Management and Bioinformatics$597,170
U19 · FY2021 · AI · contact PI
Cytoscape: A Modeling Platform for Biomolecular Networks$586,312
R01 · FY2021 · HG · contact PI
A Systems Approach to Mapping the DNA Damage Response$554,409
R01 · FY2021 · ES · contact PI
Center for Genetic Studies of Drug Abuse in Outbred Rats$355,500
P50 · FY2021 · DA · contact PI
Using Networks to Seed Hierarchical Whole-cell Models of Cancer$264,128
U54 · FY2021 · CA · contact PI
Administration and Management$242,034
P41 · FY2021 · GM · contact PI
Driving Biomedical Projects Portfolio$172,486
P41 · FY2021 · GM · contact PI
Bioinformatics$138,857
U54 · FY2021 · CA · contact PI
Spatiotemporal and functional convergence of genes implicated in ASD$137,275
U01 · FY2021 · MH
TR&D 2 - Modeling Multi-Scale Network Architecture$99,685
P41 · FY2021 · GM · contact PI
The Psychiatric Cell Map Initiative: Connecting Genomics, Subcellular Networks, and Higher Order Phenotypes$3,628,784
U01 · FY2020 · MH
Research Center for Cancer Systems Biology: Cancer Cell Map Initiative$2,071,568
U54 · FY2020 · CA
National Resource for Network Biology (NRNB)$1,995,376
P41 · FY2020 · GM · contact PI
Administration and Management$893,582
P41 · FY2020 · GM · contact PI
Cytoscape: A Modeling Platform for Biomolecular Networks$687,759
R01 · FY2020 · HG · contact PI
Proteomics Integration and Expansion of Downstream Analysis Capabilities into the CReD Portal$649,398
U01 · FY2020 · MH
A Systems Approach to Mapping the DNA Damage Response$558,146
R01 · FY2020 · ES · contact PI
Center for Genetic Studies of Drug Abuse in Outbred Rats$354,375
P50 · FY2020 · DA · contact PI
Using Networks to Seed Hierarchical Whole-cell Models of Cancer$283,026
U54 · FY2020 · CA · contact PI
Driving Biomedical Projects Portfolio$195,801
P41 · FY2020 · GM · contact PI
Cytoscape: A Modeling Platform for Biomolecular Networks$179,529
R01 · FY2020 · HG · contact PI
CORE 1: Data Management and Bioinformatics$162,077
U19 · FY2020 · AI · contact PI
Bioinformatics$152,538
U54 · FY2020 · CA · contact PI
TR&D 2 - Modeling Multi-Scale Network Architecture$110,950
P41 · FY2020 · GM · contact PI
The Psychiatric Cell Map Initiative: Connecting Genomics, Subcellular Networks, and Higher Order Phenotypes$3,605,729
U01 · FY2019 · MH
Research Center for Cancer Systems Biology: Cancer Cell Map Initiative$2,295,972
U54 · FY2019 · CA
National Resource for Network Biology (NRNB)$1,187,182
P41 · FY2019 · GM · contact PI
NDEx - the Network Data Exchange A Network Commons for Biologists$728,373
U24 · FY2019 · CA · contact PI
Cytoscape: A Modeling Platform for Biomolecular Networks$690,447
R01 · FY2019 · HG · contact PI
A Systems Approach to Mapping the DNA Damage Response$563,619
R01 · FY2019 · ES · contact PI
Center for Genetic Studies of Drug Abuse in Outbred Rats$354,375
P50 · FY2019 · DA · contact PI
Research Center for Cancer Systems Biology: Cancer Cell Map Initiative$320,834
U54 · FY2019 · CA
Using Networks to Seed Hierarchical Whole-cell Models of Cancer$315,657
U54 · FY2019 · CA · contact PI
Tech R and D_Theme1$283,712
P41 · FY2019 · GM · contact PI
Tech R and D_Theme2$266,167
P41 · FY2019 · GM · contact PI
CORE 1: Data Management and Bioinformatics$207,782
U19 · FY2019 · AI · contact PI
Core_Admin$203,047
P41 · FY2019 · GM · contact PI
Bioinformatics$188,721
U54 · FY2019 · CA · contact PI
Driving Bio Proj$117,989
P41 · FY2019 · GM · contact PI
Bioinformatics$45,834
U54 · FY2019 · CA · contact PI
Using Networks to Seed Hierarchical Whole-cell Models of Cancer$45,833
U54 · FY2019 · CA · contact PI
Tech R and D_Theme3$44,364
P41 · FY2019 · GM · contact PI
The Psychiatric Cell Map Initiative: Connecting Genomics, Subcellular Networks, and Higher Order Phenotypes$3,641,916
U01 · FY2018 · MH
Research Center for Cancer Systems Biology: Cancer Cell Map Initiative$2,179,219
U54 · FY2018 · CA
San Diego Center for Systems Biology: From Maps to Models$1,447,449
P50 · FY2018 · GM
National Resource for Network Biology (NRNB)$1,187,182
P41 · FY2018 · GM · contact PI
NDEx - the Network Data Exchange A Network Commons for Biologists$753,354
U24 · FY2018 · CA · contact PI
Cytoscape: A Modeling Platform for Biomolecular Networks$692,884
R01 · FY2018 · HG · contact PI
A Systems Approach to Mapping the DNA Damage Response$566,813
R01 · FY2018 · ES · contact PI
Using Networks to Seed Hierarchical Whole-cell Models of Cancer$298,466
U54 · FY2018 · CA · contact PI
Tech R and D_Theme1$283,713
P41 · FY2018 · GM · contact PI
Tech R and D_Theme2$266,164
P41 · FY2018 · GM · contact PI
Core_Admin$203,049
P41 · FY2018 · GM · contact PI
Bioinformatics$166,369
U54 · FY2018 · CA · contact PI
CORE 1: Data Management and Bioinformatics$137,642
U19 · FY2018 · AI · contact PI
ADMINISTRATIVE CORE$121,817
P50 · FY2018 · GM · contact PI
Driving Bio Proj$117,987
P41 · FY2018 · GM · contact PI
NETWORK ASSEMBLY AND MATHEMATICAL MODELING CORE$114,009
P50 · FY2018 · GM · contact PI
Tech R and D_Theme3$44,362
P41 · FY2018 · GM · contact PI
Research Center for Cancer Systems Biology: Cancer Cell Map Initiative$2,093,872
U54 · FY2017 · CA
San Diego Center for Systems Biology: From Maps to Models$1,458,458
P50 · FY2017 · GM
National Resource for Network Biology (NRNB)$1,187,182
P41 · FY2017 · GM · contact PI
NDEx - the Network Data Exchange A Network Commons for Biologists$771,433
U24 · FY2017 · CA · contact PI
Cytoscape: A Modeling Platform for Biomolecular Networks$707,515
R01 · FY2017 · HG · contact PI
A Systems Approach to Mapping the DNA Damage Response$583,756
R01 · FY2017 · ES · contact PI
Comparative Analysis of Genetic Interaction Networks$453,371
R01 · FY2017 · GM · contact PI
Tech R and D_Theme1$283,711
P41 · FY2017 · GM · contact PI
Using Networks to Seed Hierarchical Whole-cell Models of Cancer$281,905
U54 · FY2017 · CA · contact PI
Tech R and D_Theme2$266,169
P41 · FY2017 · GM · contact PI
Core_Admin$203,045
P41 · FY2017 · GM · contact PI
Bioinformatics$139,992
U54 · FY2017 · CA · contact PI
ADMINISTRATIVE CORE$123,444
P50 · FY2017 · GM · contact PI
NETWORK ASSEMBLY AND MATHEMATICAL MODELING CORE$121,153
P50 · FY2017 · GM · contact PI
Driving Bio Proj$117,991
P41 · FY2017 · GM · contact PI
Tech R and D_Theme3$44,366
P41 · FY2017 · GM · contact PI
San Diego Center for Systems Biology: From Maps to Models$2,746,565
P50 · FY2016 · GM
National Resource for Network Biology (NRNB)$1,187,182
P41 · FY2016 · GM · contact PI
NDEx - the Network Data Exchange A Network Commons for Biologists$592,001
U24 · FY2016 · CA · contact PI
Comparative Analysis of Genetic Interaction Networks$472,015
R01 · FY2016 · GM · contact PI
Cytoscape: A Modeling Platform for Biomolecular Networks$463,944
R01 · FY2016 · GM · contact PI
Tech R and D_Theme1$283,712
P41 · FY2016 · GM · contact PI
Tech R and D_Theme2$266,167
P41 · FY2016 · GM · contact PI
NETWORK ASSEMBLY AND MATHEMATICAL MODELING CORE$210,080
P50 · FY2016 · GM · contact PI
Core_Admin$203,047
P41 · FY2016 · GM · contact PI
ADMINISTRATIVE CORE$201,650
P50 · FY2016 · GM · contact PI
Driving Bio Proj$117,989
P41 · FY2016 · GM · contact PI
Tech R and D_Theme3$44,364
P41 · FY2016 · GM · contact PI
San Diego Center for Systems Biology: From Maps to Models$2,849,208
P50 · FY2015 · GM
National Resource for Network Biology (NRNB)$1,747,836
P41 · FY2015 · GM · contact PI
NDEx - the Network Data Exchange A Network Commons for Biologists$686,351
U24 · FY2015 · CA · contact PI
A Systems Approach to Mapping the DNA Damage Response$550,671
R01 · FY2015 · ES · contact PI
Cytoscape: A Modeling Platform for Biomolecular Networks$480,289
R01 · FY2015 · GM · contact PI
Comparative Analysis of Genetic Interaction Networks$471,932
R01 · FY2015 · GM · contact PI
Tech R and D_Theme1$278,588
P41 · FY2015 · GM · contact PI
Tech R and D_Theme2$261,045
P41 · FY2015 · GM · contact PI
Core_Admin$227,208
P41 · FY2015 · GM · contact PI
NETWORK ASSEMBLY AND MATHEMATICAL MODELING CORE$221,649
P50 · FY2015 · GM · contact PI
ADMINISTRATIVE CORE$196,449
P50 · FY2015 · GM · contact PI
Systems Biology and Integrative Networks Core (Page 266)$192,930
P30 · FY2015 · MH · contact PI
Driving Bio Proj$145,489
P41 · FY2015 · GM · contact PI
Tech R and D_Theme3$63,627
P41 · FY2015 · GM · contact PI
Center for Systems Biology of Cellular Stress Responses$2,607,983
P50 · FY2014 · GM · contact PI
Resource for Analysis, Vizualization, and Integration of Networks (RAVIN)$1,107,724
P41 · FY2014 · GM · contact PI
NDEx - the Network Data Exchange A Network Commons for Biologists$641,654
U24 · FY2014 · CA · contact PI
A Systems Approach to Mapping the DNA Damage Response$545,162
R01 · FY2014 · ES · contact PI
Cytoscape: A Modeling Platform for Biomolecular Networks$482,105
R01 · FY2014 · GM · contact PI
Comparative Analysis of Genetic Interaction Networks$480,934
R01 · FY2014 · GM · contact PI
GENOTOXIC RESPONSES$461,120
P50 · FY2014 · GM · contact PI
Systems Biology and Integrative Networks Core (Page 266)$200,864
P30 · FY2014 · MH · contact PI
CORE A: NETWORK ASSEMBLY$129,393
P50 · FY2014 · GM · contact PI
Center for Systems Biology of Cellular Stress Responses$2,907,263
P50 · FY2013 · GM · contact PI
Resource for Analysis, Vizualization, and Integration of Networks (RAVIN)$1,184,616
P41 · FY2013 · GM · contact PI
A Systems Approach to Mapping the DNA Damage Response$539,655
R01 · FY2013 · ES · contact PI
GENOTOXIC RESPONSES$505,837
P50 · FY2013 · GM · contact PI
Cytoscape: A Modeling Platform for Biomolecular Networks$495,855
R01 · FY2013 · GM · contact PI
Systems Biology and Integrative Networks Core (Page 266)$196,083
P30 · FY2013 · MH · contact PI
CORE A: NETWORK ASSEMBLY$148,950
P50 · FY2013 · GM · contact PI
Resource for Analysis, Vizualization, and Integration of Networks (RAVIN)$1,583,903
P41 · FY2012 · GM · contact PI
A Systems Approach to Mapping the DNA Damage Response$550,944
R01 · FY2012 · ES · contact PI
GENOTOXIC RESPONSES$506,874
P50 · FY2012 · GM · contact PI
Cytoscape: A Modeling Platform for Biomolecular Networks$437,972
R01 · FY2012 · GM · contact PI
Systems Biology and Integrative Networks Core (Page 266)$207,267
P30 · FY2012 · MH · contact PI
CORE A: NETWORK ASSEMBLY$156,006
P50 · FY2012 · GM · contact PI
Systems Biology and Integrative Networks Core (Page 266)$11,249
P30 · FY2012 · MH · contact PI
NATIONAL RESOURCE FOR NETWORK BIOLOGY (NRNB)$1,436,686
P41 · FY2011 · RR · contact PI
Resource for Analysis, Vizualization, and Integration of Networks (RAVIN)$1,163,060
P41 · FY2011 · RR · contact PI
A Systems Approach to Mapping the DNA Damage Response$564,570
R01 · FY2011 · ES · contact PI
GENOTOXIC RESPONSES$546,051
P50 · FY2011 · GM · contact PI
Comparative Analysis of Genetic and Physical Interaction Networks in Yeasts$486,849
R01 · FY2011 · GM · contact PI
Cytoscape: A Modeling Platform for Biomolecular Networks$422,882
R01 · FY2011 · GM · contact PI
Resource for Analysis, Vizualization, and Integration of Networks (RAVIN)$273,626
P41 · FY2011 · RR · contact PI
Systems Biology and Integrative Networks Core (Page 266)$222,997
P30 · FY2011 · MH · contact PI
Massively parallel epigenomics: building new value with current resources$178,856
R21 · FY2011 · HG
CORE A: NETWORK ASSEMBLY$165,763
P50 · FY2011 · GM · contact PI
Resource for Analysis, Vizualization, and Integration of Networks (RAVIN)$1,604,021
P41 · FY2010 · RR · contact PI
RESOURCE FOR ANALYSIS, VIZUALIZATION, AND INTEGRATION OF NETWORKS (RAVIN)$1,604,021
P41 · FY2010 · RR · contact PI
GENOTOXIC RESPONSES$526,570
P50 · FY2010 · GM · contact PI
Comparative Analysis of Genetic and Physical Interaction Networks in Yeasts$495,286
R01 · FY2010 · GM · contact PI
Cytoscape: A Modeling Platform for Biomolecular Networks$427,772
R01 · FY2010 · GM · contact PI
Massively parallel epigenomics: building new value with current resources$218,414
R21 · FY2010 · HG
CORE A: NETWORK ASSEMBLY$154,675
P50 · FY2010 · GM · contact PI
Comparative Analysis of Genetic and Physical Interaction Networks in Yeasts$66,540
R01 · FY2010 · GM · contact PI
A Systems Approach to Mapping the DNA Damage Response$496,071
R01 · FY2009 · ES · contact PI
Comparative Analysis of Genetic and Physical Interaction Networks in Yeasts$493,888
R01 · FY2009 · GM · contact PI
Cytoscape: A Modeling Platform for Biomolecular Networks$450,457
R01 · FY2009 · GM · contact PI
A Systems Approach to Mapping the DNA Damage Response$313,600
R01 · FY2009 · ES · contact PI
Comparative Analysis of Genetic and Physical Interaction Networks in Yeasts$528,053
R01 · FY2008 · GM · contact PI
A Systems Approach to Mapping the DNA Damage Response$488,140
R01 · FY2008 · ES · contact PI
Cytoscape: A Modeling Platform for Biomolecular Networks$373,294
R01 · FY2008 · GM · contact PI
A Systems Approach to Mapping the DNA Damage Response$486,116
R01 · FY2007 · ES · contact PI
Cytoscape: A Modeling Platform for Biomolecular Networks$462,780
R01 · FY2007 · GM · contact PI
BIOINFORMATICS: METHODS & MODELS FOR PROTEOMIC NETWORK ANALYSIS$151,212
P41 · FY2007 · RR · contact PI
SYSTEMS APPROACH TO MAPPING THE DNA DAMAGE RESPONSE$46,527
P41 · FY2007 · RR · contact PI
A Systems Approach to Mapping the DNA Damage Response$22,693
R01 · FY2007 · ES · contact PI
A Systems Approach to Mapping the DNA Damage Response$584,854
R01 · FY2006 · ES · contact PI