GGrantIndex
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John Robert Yates

Scripps Research Institute, The

Google Scholar ↗PubMed ↗ORCID ↗
$49,942,444
Attributed
$61,295,686
Total exposure
98
Grants
85
Lead (contact PI)

Attributed= this PI's even-split share of every grant they're on (the fair, additive number). Exposure = full size of all those grants.

Funding over time

peak $4.6M · FY2005–25
$5M$3.8M$2.5M$1.3M$0
'05
'06
'07
'08
'09
'10
'11
'12
'13
'14
'15
'16
'17
'18
'19
'20
'21
'22
'23
'24
'25

Funding mix

By agency

NIH$63,582,893 · 100

By mechanism

R01$35,423,876 · 9
U01$5,195,925 · 1
U19$4,900,031 · 6
RF1$3,017,531 · 1
RC2$2,957,107 · 1
P41$2,290,777 · 61

Top collaborators

Most similar at Scripps Research Institute, The

Same institution · by research overlap

Others in their field

Top investigators on “Proteins”

Research focus

ProteinsProteomicsMolecularGrantBaseMass Spectrum AnalysisTechnologyLabelFundingResearch PersonnelResourcesProteomeSamplingPathway InteractionsUnited States National Institutes Of HealthSourceCellsInstitutionComputer Retrieval Of Information On Scientific Projects DatabaseSignal TransductionComplexAlzheimer&AposPharmaceutical PreparationsMeasurement

Grant awards (189)

Cell Specific Perturbations of the Proteome in Alzheimer's Disease$1,338,900
R01 · FY2025 · AG · contact PI
Analysis of protein interactions in neurodegenerative disease$692,796
R01 · FY2025 · AG · contact PI
Proteogenetics of Autism Spectrum Disorders$683,101
R01 · FY2025 · MH · contact PI
The CFTR Interactome$539,304
R01 · FY2025 · HL · contact PI
3D Proteomics at Single Cell Resolution with Covalent Protein Painting (CPP)$240,000
R33 · FY2025 · CA · contact PI
Neuroproteomics Core - Yates$229,625
P60 · FY2025 · AA · contact PI
Cell Specific Perturbations of the Proteome in Alzheimer's Disease$1,317,961
R01 · FY2024 · AG · contact PI
Analysis of protein interactions in neurodegenerative disease$706,934
R01 · FY2024 · AG · contact PI
Proteogenetics of Autism Spectrum Disorders$684,218
R01 · FY2024 · MH · contact PI
The CFTR Interactome$528,518
R01 · FY2024 · HL · contact PI
Development of a blood-based test for neurodegenerative diseases$472,695
R41 · FY2024 · AG
3D Proteomics at Single Cell Resolution with Covalent Protein Painting (CPP)$240,092
R33 · FY2024 · CA · contact PI
Neuroproteomics Core - Yates$229,392
P60 · FY2024 · AA · contact PI
Cell Specific Perturbations of the Proteome in Alzheimer's Disease$1,317,961
R01 · FY2023 · AG · contact PI
Analysis of protein interactions in neurodegenerative disease$706,934
R01 · FY2023 · AG · contact PI
Proteogenetics of Autism Spectrum Disorders$610,597
R01 · FY2023 · MH · contact PI
The CFTR Interactome$540,104
R01 · FY2023 · HL · contact PI
Neuroproteomics Core - Yates$231,997
P60 · FY2023 · AA · contact PI
High Throughput Methods for Single Cell Proteomics$226,250
R21 · FY2023 · MH · contact PI
Cell Specific Perturbations of the Proteome in Alzheimer's Disease$1,317,961
R01 · FY2022 · AG · contact PI
Analysis of protein interactions in neurodegenerative disease$693,264
R01 · FY2022 · AG · contact PI
Proteogenetics of Autism Spectrum Disorders$637,920
R01 · FY2022 · MH · contact PI
The CFTR Interactome$539,068
R01 · FY2022 · HL · contact PI
High Throughput Methods for Single Cell Proteomics$266,250
R21 · FY2022 · MH · contact PI
Cell Specific Perturbations of the Proteome in Alzheimer's Disease$1,317,961
R01 · FY2021 · AG · contact PI
Proteogenetics of Autism Spectrum Disorders$672,469
R01 · FY2021 · MH · contact PI
Protein Detection and Quantitation by Mass Spectrometry$286,356
P41 · FY2021 · GM · contact PI
Proteogenetics of Autism Spectrum Disorders$608,199
R01 · FY2020 · MH · contact PI
Protein Detection and Quantitation by Mass Spectrometry$286,356
P41 · FY2020 · GM · contact PI
Proteogenetics of Autism Spectrum Disorders$608,199
R01 · FY2019 · MH · contact PI
The CFTR Interactome$481,250
R01 · FY2019 · HL · contact PI
Measurement of Aberrant Protein Folds in Malignant Cells with Proteomics and Mass Spectrometry$391,503
R33 · FY2019 · CA · contact PI
Protein Detection and Quantitation by Mass Spectrometry$289,692
P41 · FY2019 · GM · contact PI
Protein conformer-resolved analysis of protein aggregates in Alzheimer's disease with mass spectrometry$211,200
RF1 · FY2019 · AG · contact PI
Protein conformer-resolved analysis of protein aggregates in Alzheimer's disease with mass spectrometry$2,806,331
RF1 · FY2018 · AG · contact PI
Proteogenetics of Autism Spectrum Disorders$608,199
R01 · FY2018 · MH · contact PI
The CFTR Interactome$481,250
R01 · FY2018 · HL · contact PI
Measurement of Aberrant Protein Folds in Malignant Cells with Proteomics and Mass Spectrometry$403,607
R33 · FY2018 · CA · contact PI
Protein Detection and Quantitation by Mass Spectrometry$289,690
P41 · FY2018 · GM · contact PI
Proteomic characterization of exosomes from AD patients$844,015
R56 · FY2017 · AG · contact PI
Proteogenetics of Autism Spectrum Disorders$608,199
R01 · FY2017 · MH · contact PI
Quantitative Proteome Analysis of Brain Development$569,328
R01 · FY2017 · MH · contact PI
The CFTR Interactome$481,250
R01 · FY2017 · HL · contact PI
Measurement of Aberrant Protein Folds in Malignant Cells with Proteomics and Mass Spectrometry$435,649
R33 · FY2017 · CA · contact PI
Protein Detection and Quantitation by Mass Spectrometry$289,172
P41 · FY2017 · GM · contact PI
Proteogenetics of Autism Spectrum Disorders$583,992
R01 · FY2016 · MH · contact PI
Quantitative Proteome Analysis of Brain Development$569,328
R01 · FY2016 · MH · contact PI
The CFTR Interactome$481,250
R01 · FY2016 · HL · contact PI
Genomics for Transplantation: Discovery and Biomarkers$1,787,207
U19 · FY2015 · AI · contact PI
Genomics$777,797
U19 · FY2015 · AI · contact PI
Quantitative Proteome Analysis of Brain Development$560,456
R01 · FY2015 · MH · contact PI
Proteomics$129,112
U19 · FY2015 · AI · contact PI
Pulse-Chase Labeling with 15N and AHA in an Alzheimer's Mouse Model$94,750
R03 · FY2015 · AG · contact PI
Pulse-Chase Labeling with 15N and AHA in an Alzheimer's Mouse Model$91,907
R03 · FY2015 · AG · contact PI
Administrative Core$57,237
U19 · FY2015 · AI · contact PI
Quantitative Proteome Analysis of Brain Development$560,456
R01 · FY2014 · MH · contact PI
Proteogenetics$510,801
R01 · FY2014 · MH · contact PI
Proteomic Profiling of CFTR Protein Interaction$460,602
R01 · FY2014 · HL · contact PI
Proteomics$176,358
U19 · FY2014 · AI · contact PI
Pulse-Chase Labeling with 15N and AHA in an Alzheimer's Mouse Model$94,750
R03 · FY2014 · AG · contact PI
Quantitative Proteome Analysis of Brain Development$622,727
R01 · FY2013 · MH · contact PI
Proteogenetics$542,713
R01 · FY2013 · MH · contact PI
Proteomic Profiling of CFTR Protein Interaction$447,442
R01 · FY2013 · HL · contact PI
PROTEOMICS$395,077
P01 · FY2013 · AG · contact PI
Proteomics$139,753
U19 · FY2013 · AI · contact PI
Proteomic Profiling of CFTR Protein Interaction$470,003
R01 · FY2012 · HL · contact PI
Quantitative Proteome Analysis of Brain Development$422,111
R01 · FY2012 · MH · contact PI
PROTEOMICS$418,280
P01 · FY2012 · AG · contact PI
Proteomics$150,117
U19 · FY2012 · AI · contact PI
Proteomic Profiling of CFTR Protein Interaction$474,750
R01 · FY2011 · HL · contact PI
Investigating the molecular basis of primaquine resistance$473,750
R56 · FY2011 · AI · contact PI
Quantitative Proteome Analysis of Brain Development$422,111
R01 · FY2011 · MH · contact PI
PROTEOMICS$418,490
P01 · FY2011 · AG · contact PI
Proteomics$186,883
U19 · FY2011 · AI · contact PI
PATTERNLAB FOR PROTEOMICS: A TOOL FOR DIFFERENTIAL SHOTGUN PROTEOMICS$29,494
P41 · FY2011 · RR · contact PI
TRAINING WITH YATES$9,940
P41 · FY2011 · RR · contact PI
SEMINARS GIVEN BY JOHN R YATES III$9,940
P41 · FY2011 · RR · contact PI
SOFTWARE DISTRIBUTED BY YATES LAB, 2010-2011$9,940
P41 · FY2011 · RR · contact PI
A Quantitative Proteomics Platform to Characterize the Nicotine-Dependent Brain$1,413,284
RC2 · FY2010 · DA
Proteomic Profiling of CFTR Protein Interaction$474,750
R01 · FY2010 · HL · contact PI
Quantitative Proteome Analysis of Brain Development$426,375
R01 · FY2010 · MH · contact PI
PROTEOMICS$423,002
P01 · FY2010 · AG · contact PI
Proteomic Analysis of C. Elegans Insulin Signaling$376,704
R01 · FY2010 · DK · contact PI
Proteomics of Kidney Transplantation$122,304
U19 · FY2010 · AI · contact PI
TRAINING IN MASS SPECTROMETRY BY THE YATES LAB IN 2009-2010$9,955
P41 · FY2010 · RR · contact PI
SEMINARS GIVEN BY JOHN R YATES III$9,955
P41 · FY2010 · RR · contact PI
SOFTWARE DEVELOPED AND DISTRIBUTED BY YATES LAB, 2009-2010$9,955
P41 · FY2010 · RR · contact PI
GENOME ANNOTATION BY MASS SPECTROMETRY$9,489
P41 · FY2010 · RR · contact PI
QUANTITATIVE PROTEOME ANALYSIS OF BRAIN DEVELOPMENT$9,489
P41 · FY2010 · RR · contact PI
IDENTIFYING DIFFERENCES IN PROTEIN EXPRESSION LEVELS BY SPECTRAL COUNTING$9,489
P41 · FY2010 · RR · contact PI
EVALUATION OF LTQ-ORBITRAP$9,489
P41 · FY2010 · RR · contact PI
METHOD DEVELOPMENT FOR MEMBRANE PROTEIN ANALYSIS$9,489
P41 · FY2010 · RR · contact PI
LABEL-FREE COMPARISON OF COMPLEX PROTEIN SAMPLES$9,489
P41 · FY2010 · RR · contact PI
PROTEIN COMPLEXES IN THE YEAST PROTEOME$9,489
P41 · FY2010 · RR · contact PI
GENOMIC DNA INTEGRITY IN STEM CELLS$9,489
P41 · FY2010 · RR · contact PI
IDENTIFY PROTEINS INVOLVED IN AMYLOID-BETA FIBRILS DISAGGREGATION IN C ELEGANS$9,489
P41 · FY2010 · RR · contact PI
DECIPHERING THE DNA DAMAGE RESPONSE IN THE GERM LINE BY PROTEOMICS$839
P41 · FY2010 · RR · contact PI
PROTEOMIC OVERVIEW OF GLIOBLASTOMA CELLS EXPOSED TO PERILLYL ALCOHOL$839
P41 · FY2010 · RR · contact PI
CELL SURFACE PROTEOLYSIS REGULATION VIA PLASMINOGEN RECEPTOR DYNAMICS$839
P41 · FY2010 · RR · contact PI
IDENTIFICATION OF THE HEPATITIS C VIRUS (HCV) PROTEOME$839
P41 · FY2010 · RR · contact PI
A Quantitative Proteomics Platform to Characterize the Nicotine-Dependent Brain$1,543,823
RC2 · FY2009 · DA
Proteomic Profiling of CFTR Protein Interaction$449,200
R01 · FY2009 · HL · contact PI
Quantitative Proteome Analysis of Brain Development$426,375
R01 · FY2009 · MH · contact PI
PROTEOMICS$412,414
P01 · FY2009 · AG · contact PI
Proteomic Analysis of C. Elegans Insulin Signaling$371,070
R01 · FY2009 · DK · contact PI
Proteomics of Kidney Transplantation$130,149
U19 · FY2009 · AI · contact PI
Proteomic Profiling of CFTR Protein Interaction$449,200
R01 · FY2008 · HL · contact PI
Quantitative Proteome Analysis of Brain Development$426,375
R01 · FY2008 · MH · contact PI
Proteomic Analysis of C. Elegans Insulin Signaling$361,910
R01 · FY2008 · DK · contact PI
Proteomics of Kidney Transplantation$249,164
U19 · FY2008 · AI · contact PI
Differential Proteome Analysis on Plasmodium falciparum after Drug Exposure$159,515
R21 · FY2008 · AI · contact PI
TRAINING IN MASS SPECTROMETRY BY THE LAB$13,965
P41 · FY2008 · RR · contact PI
SEMINARS GIVEN BY JOHN R YATES III, 2007-2008$13,653
P41 · FY2008 · RR · contact PI
COMBINING PROTEIN-BASED IMAC, PEPTIDE-BASED IMAC, AND MUDPIT$9,967
P41 · FY2008 · RR · contact PI
MOTIF-SPECIFIC SAMPLING OF PHOSPHOPROTEOMES$9,967
P41 · FY2008 · RR · contact PI
CHARACTERIZATION OF GLOBAL YEAST QUANTITATIVE PROTEOME DATA GENERATED FROM THE W$9,967
P41 · FY2008 · RR · contact PI
LABEL-FREE QUANTIFICATION VIA IMPROVED CHROMATOGRAPHIC ELUTION REPRODUCIBILITY$9,967
P41 · FY2008 · RR · contact PI
CUSTOM DATA ACQUISITION USING THERMOELECTRON CONTROL OBJECT MODEL (COM) LIBRARY$9,967
P41 · FY2008 · RR · contact PI
INVESTIGATION OF THE POROUS LAYER OPEN TUBULAR (PLOT) REVERSE PHASE COLUMN$9,967
P41 · FY2008 · RR · contact PI
LABEL-FREE COMPARISON OF COMPLEX PROTEIN SAMPLES$9,967
P41 · FY2008 · RR · contact PI
PROTEIN COMPLEXES IN THE YEAST PROTEOME$9,967
P41 · FY2008 · RR · contact PI
RCADIA: SIMPLE AUTOMATION PLATFORM FOR COMPARATIVE MULTIDIMENSIONAL PROTEIN IDEN$9,967
P41 · FY2008 · RR · contact PI
OPTIMIZING TIO2-BASED PHOSPHOPEPTIDE ENRICHMENT FOR MASS SPEC ANALYSIS$9,967
P41 · FY2008 · RR · contact PI
A QUANTITATIVE ANALYSIS SOFTWARE TOOL FOR MASS SPECTROMETRY-BASED PROTEOMICS$9,967
P41 · FY2008 · RR · contact PI
IMPROVING PROTEIN IDENTIFICATION SENSITIVITY BY COMBINING MS AND MS/MS$9,967
P41 · FY2008 · RR · contact PI
METHOD DEVELOPMENT FOR MEMBRANE PROTEIN ANALYSIS$9,967
P41 · FY2008 · RR · contact PI
QUANTIFICATION OF THE SYNAPTOSOMAL PROTEOME OF THE RAT CEREBELLUM DURING POST-NA$819
P41 · FY2008 · RR · contact PI
SALIVARY GLAND EXOSOME PROTEOME$819
P41 · FY2008 · RR · contact PI
GENOME ANNOTATION BY MASS SPECTROMETRY$819
P41 · FY2008 · RR · contact PI
DECIPHERING THE DNA DAMAGE RESPONSE IN THE GERM LINE BY PROTEOMICS$819
P41 · FY2008 · RR · contact PI
GENOMIC DNA INTEGRITY IN STEM CELLS$819
P41 · FY2008 · RR · contact PI
QUANTITATIVE MASS SPECTROMETRY IDENTIFIES INSULIN SIGNALING TARGETS IN C ELEGAN$819
P41 · FY2008 · RR · contact PI
IDENTIFY PROTEINS INVOLVED IN AMYLOID-BETA FIBRILS DISAGGREGATION IN C ELEGANS$819
P41 · FY2008 · RR · contact PI
IDENTIFICATION OF THE HEPATITIS C VIRUS (HCV) PROTEOME$819
P41 · FY2008 · RR · contact PI
SOFTWARE DISTRIBUTED BY YATES LAB, 2007-2008$318
P41 · FY2008 · RR · contact PI
Catalogue of Human Salivary Secretory Components$1,115,545
U01 · FY2007 · DE · contact PI
Catalogue of Human Salivary Secretory Components$544,741
U01 · FY2007 · DE · contact PI
Proteomic Profiling of CFTR Protein Interaction$440,667
R01 · FY2007 · HL · contact PI
Quantitative Proteome Analysis of Brain Development$400,441
R01 · FY2007 · MH · contact PI
Proteomic Analysis of C. Elegans Insulin Signaling$381,819
R01 · FY2007 · DK · contact PI
Proteomics of Kidney Transplantation$247,447
U19 · FY2007 · AI · contact PI
Differential Proteome Analysis on Plasmodium falciparum after Drug Exposure$182,128
R21 · FY2007 · AI · contact PI
TAGLESS IDENTIFICATION OF PROTEIN COMPLEXES$78,023
P41 · FY2007 · RR · contact PI
AUTOMATIC VALIDATION OF PHOSPHOPEPTIDE IDENTIFICATIONS FROM TANDEM MASS SPECTRA$51,532
P41 · FY2007 · RR · contact PI
15N METABOLIC LABELING OF MAMMALIAN TISSUE WITH SLOW PROTEIN TURNOVER$51,532
P41 · FY2007 · RR · contact PI
RELATIVE QUANTIFICATION OF STABLE ISOTOPE LABELED PEPTIDES$51,532
P41 · FY2007 · RR · contact PI
TRAINING IN MASS SPECTROMETRY$34,335
P41 · FY2007 · RR · contact PI
SOFTWARE DISTRIBUTION - YATES, 2006-2007$17,167
P41 · FY2007 · RR · contact PI
SEMINARS AND REVIEWS ON PROTEOMICS, YATES, 2006-2007$17,167
P41 · FY2007 · RR · contact PI
PROTEOMIC OF BDNF INDUCES WIDESPREAD CHANGES IN SYNAPTIC PROTEIN CONTENT$6,224
P41 · FY2007 · RR · contact PI
Catalogue of Human Salivary Secretory Components$1,144,832
U01 · FY2006 · DE · contact PI
Proteomic Profiling of CFTR Protein Interaction$453,828
R01 · FY2006 · HL · contact PI
Quantitative Proteome Analysis of Brain Development$412,401
R01 · FY2006 · MH · contact PI
Proteomics of Kidney Transplantation$252,633
U19 · FY2006 · AI · contact PI
TRAINING IN MASS SPECTROMETRY$40,121
P41 · FY2006 · RR · contact PI
SEMINARS AND REVIEWS ON MASS SPECTROMETRY$40,121
P41 · FY2006 · RR · contact PI
MEASUREMENT OF THE ISOTOPE ENRICHMENT OF STABLE ISOTOPE-LABELED PROTEINS USING$36,699
P41 · FY2006 · RR · contact PI
CROSS-CORRELATION ALGORITHM FOR CALCULATION OF PEPTIDE MOLECULAR WEIGHT FROM TA$20,051
P41 · FY2006 · RR · contact PI
LARGE-SCALE LC-MS/MS FOR SILVER- AND COOMASSIE BLUE-STAINED POLYACRYLAMIDE GELS$20,051
P41 · FY2006 · RR · contact PI
CENTRAL LIMIT THEOREM AS AN APPROXIMATION FOR INTENSITY-BASED SCORING FUNCTION$20,051
P41 · FY2006 · RR · contact PI
PERFORMANCE OF A LINEAR ION TRAP-ORBITRAP HYBRID FOR PEPTIDE ANALYSIS$20,051
P41 · FY2006 · RR · contact PI
QUANTITATIVE PHOSPHOPROTEOMIC ANALYSIS OF THE TUMOR NECROSIS FACTOR PATHWAY$2,859
P41 · FY2006 · RR · contact PI
Catalogue of Human Salivary Secretory Components$1,183,540
U01 · FY2005 · DE
High Performance Mass Spectrometer for Proteomics$500,000
S10 · FY2005 · RR
Proteomic Profiling of CFTR Protein Interaction$464,750
R01 · FY2005 · HL
Quantitative Proteome Analysis of Brain Development$422,325
R01 · FY2005 · MH
Proteomics of Kidney Transplantation$247,754
U19 · FY2005 · AI
Proteomic Analysis of C. elegans Insulin Signaling$143,850
R21 · FY2005 · DK
HIGH PERFORMANCE MASS SPECT FOR PROTEOMICS: AGING$120,875
S10 · FY2005 · RR
HIGH PERFORMANCE MASS SPECT FOR PROTEOMICS: CYSTIC FIBROSIS$120,875
S10 · FY2005 · RR
HIGH PERFORMANCE MASS SPECT FOR PROTEOMICS: CANCER$120,875
S10 · FY2005 · RR
HIGH PERFORMANCE MASS SPECT FOR PROTEOMICS: CVD, STROKE$120,875
S10 · FY2005 · RR
HIGH PERFORMANCE MASS SPECT FOR PROTEOMICS: HIV$16,500
S10 · FY2005 · RR
Catalogue of Human Salivary Secretory Components$1,207,267
U01 · FY2004 · DE
Quantitative Proteome Analysis of Brain Development$422,325
R01 · FY2004 · MH
Proteomics of Kidney Transplantation$246,116
U19 · FY2004 · AI
Proteomic Analysis of C. elegans Insulin Signaling$165,775
R21 · FY2004 · DK
Quantitative Proteome Analysis of Brain Development$419,261
R01 · FY2003 · MH
PROTEOME ANALYSIS OF NORMAL AND CATARACTOUS LENSES$397,465
R01 · FY2003 · EY
Dissecting the Ubiquitin-mediated DNA Damage Response$277,800
R21 · FY2003 · ES
Mass Spectrometry in Systems Biology$5,000
R13 · FY2003 · GM
PROTEOME ANALYSIS OF NORMAL AND CATARACTOUS LENSES$385,887
R01 · FY2002 · EY
Dissecting the Ubiquitin-mediated DNA Damage Response$277,800
R21 · FY2002 · ES
Core--Proteomics$0
P30 · FY2002 · EY
PROTEOME ANALYSIS OF NORMAL AND CATARACTOUS LENSES$364,137
R01 · FY2001 · EY
DIRECT MS ANALYSIS OF COMPLEX PROTEIN MIXTURES$270,302
R33 · FY2001 · CA
Core--Proteomics$0
P30 · FY2001 · EY
DIRECT MS ANALYSIS OF COMPLEX PROTEIN MIXTURES$281,981
R33 · FY2000 · CA
PROTEOME ANALYSIS OF NORMAL AND CATARACTOUS LENSES$276,024
R01 · FY2000 · EY